Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28729A0A1B0GSW2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm28729A0A1B0GSW2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28729A0A1B0GSW2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28729A0A1B0GSW2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28729A0A1B0GSW2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28729A0A1B0GSW2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28729A0A1B0GSW2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm20049-201ENSMUST00000219950 730 ntBASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm28729A0A1B0GSW2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm28729A0A1B0GSW2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm28729A0A1B0GSW2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28729A0A1B0GSW2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28729A0A1B0GSW2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm22240-201ENSMUST00000175225 82 ntBASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28729A0A1B0GSW2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms