Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Lnp1A0A1B0GSK3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Lnp1A0A1B0GSK3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Lnp1A0A1B0GSK3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Smad6-203ENSMUST00000179458 273 ntBASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Lnp1A0A1B0GSK3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm43017-201ENSMUST00000198296 752 ntBASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.94■□□□□ 0.14
Lnp1A0A1B0GSK3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.93■□□□□ 0.14
Lnp1A0A1B0GSK3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lnp1A0A1B0GSK3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm40848-201ENSMUST00000221998 324 ntBASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lnp1A0A1B0GSK3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Gm11421-201ENSMUST00000122124 294 ntBASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms