Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Gm8493-201ENSMUST00000196881 489 ntBASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Spcs1-204ENSMUST00000226782 949 ntBASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv17A0A140T8P8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv17A0A140T8P8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv17A0A140T8P8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms