Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv6-25A0A140T8N7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv6-25A0A140T8N7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Igkv6-25A0A140T8N7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv6-25A0A140T8N7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv6-25A0A140T8N7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Igkv6-25A0A140T8N7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv6-25A0A140T8N7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Igkv6-25A0A140T8N7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Gm10653-202ENSMUST00000139570 835 ntBASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv6-25A0A140T8N7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Gm12527-201ENSMUST00000117967 564 ntBASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv6-25A0A140T8N7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv6-25A0A140T8N7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv6-25A0A140T8N7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv6-25A0A140T8N7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv6-25A0A140T8N7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.97■□□□□ 0.47
Igkv6-25A0A140T8N7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.97■□□□□ 0.47
Igkv6-25A0A140T8N7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Igkv6-25A0A140T8N7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms