Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Reep4-203ENSMUST00000226563 1444 ntBASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Cfap99A0A140LIX9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cfap99A0A140LIX9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Cfap99A0A140LIX9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Cfap99A0A140LIX9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cfap99A0A140LIX9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.95■■□□□ 1.26
Cfap99A0A140LIX9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cfap99A0A140LIX9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cfap99A0A140LIX9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.94■■□□□ 1.26
Cfap99A0A140LIX9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cfap99A0A140LIX9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cfap99A0A140LIX9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.94■■□□□ 1.26
Cfap99A0A140LIX9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Cfap99A0A140LIX9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cfap99A0A140LIX9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
Cfap99A0A140LIX9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cfap99A0A140LIX9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.92■■□□□ 1.26
Cfap99A0A140LIX9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Cfap99A0A140LIX9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cfap99A0A140LIX9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cfap99A0A140LIX9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cfap99A0A140LIX9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Cfap99A0A140LIX9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cfap99A0A140LIX9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cfap99A0A140LIX9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cfap99A0A140LIX9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Gm7514-201ENSMUST00000209475 934 ntBASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap99A0A140LIX9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cfap99A0A140LIX9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cfap99A0A140LIX9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cfap99A0A140LIX9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cfap99A0A140LIX9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cfap99A0A140LIX9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap99A0A140LIX9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap99A0A140LIX9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap99A0A140LIX9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms