Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9847-201ENSMUST00000052528 599 ntBASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.77■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms