Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Tcrg-V3A0A0G2JEW2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.58■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.58■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.57■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm7514-201ENSMUST00000209475 934 ntBASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcrg-V3A0A0G2JEW2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms