Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gm12251-201ENSMUST00000117893 792 ntBASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Mir7075-201ENSMUST00000184187 82 ntBASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gm12821-201ENSMUST00000120022 600 ntBASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Gm27454-201ENSMUST00000185090 204 ntBASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Serp2-204ENSMUST00000228055 705 ntBASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms