Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.39□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-4A0A0B4J1K2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm27801-201ENSMUST00000184174 223 ntBASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9-4A0A0B4J1K2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-4A0A0B4J1K2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-4A0A0B4J1K2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms