Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv5-43A0A0B4J1J2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Nespas-201ENSMUST00000143738 1083 ntBASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-43A0A0B4J1J2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Igkv5-43A0A0B4J1J2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms