Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv20A0A0B4J1H5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Gm43530-201ENSMUST00000195920 274 ntBASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv20A0A0B4J1H5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv20A0A0B4J1H5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv20A0A0B4J1H5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv20A0A0B4J1H5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv20A0A0B4J1H5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.17■□□□□ 0.34
Trbv20A0A0B4J1H5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv20A0A0B4J1H5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms