Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-59A0A0A6YXE0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.51□□□□□ -0.25
Ighv1-59A0A0A6YXE0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms