Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 AA386476-201ENSMUST00000098781 1665 ntBASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.52□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-11A0A0A6YWI9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms