Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Gm28778A0A087WSK7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28778A0A087WSK7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28778A0A087WSK7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28778A0A087WSK7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Iqck-206ENSMUST00000208658 2891 ntBASIC15.58■□□□□ 0.08
Gm28778A0A087WSK7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Gm15039-201ENSMUST00000118914 875 ntBASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Golph3-202ENSMUST00000226517 2359 ntBASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Gm28778A0A087WSK7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Gm7860-201ENSMUST00000121190 879 ntBASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28778A0A087WSK7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28778A0A087WSK7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms