Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav21-dv12A0A075B6C4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav21-dv12A0A075B6C4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav21-dv12A0A075B6C4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav21-dv12A0A075B6C4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav21-dv12A0A075B6C4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trav21-dv12A0A075B6C4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav21-dv12A0A075B6C4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav21-dv12A0A075B6C4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav21-dv12A0A075B6C4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Trav21-dv12A0A075B6C4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav21-dv12A0A075B6C4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav21-dv12A0A075B6C4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav21-dv12A0A075B6C4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav21-dv12A0A075B6C4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms