Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Gm10399-202ENSMUST00000202768 748 ntBASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-5A0A075B6B5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 AA386476-201ENSMUST00000098781 1665 ntBASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-5A0A075B6B5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-5A0A075B6B5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-5A0A075B6B5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Gm10420-201ENSMUST00000121713 882 ntBASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms