Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-7A0A075B6B0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-7A0A075B6B0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-7A0A075B6B0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-7A0A075B6B0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Serp2-204ENSMUST00000228055 705 ntBASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trav6d-7A0A075B6B0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Mir7075-201ENSMUST00000184187 82 ntBASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-7A0A075B6B0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-7A0A075B6B0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm43530-201ENSMUST00000195920 274 ntBASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-7A0A075B6B0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-7A0A075B6B0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms