Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-7A0A075B6A6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-7A0A075B6A6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6n-7A0A075B6A6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6n-7A0A075B6A6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6n-7A0A075B6A6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6n-7A0A075B6A6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6n-7A0A075B6A6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-7A0A075B6A6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Golph3-202ENSMUST00000226517 2359 ntBASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-7A0A075B6A6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 162.9 ms