Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-1A0A075B644 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-1A0A075B644 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gm42778-201ENSMUST00000199644 553 ntBASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gm42569-201ENSMUST00000200539 472 ntBASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gm42642-201ENSMUST00000200683 355 ntBASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gm18671-201ENSMUST00000214826 683 ntBASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-1A0A075B644 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.59□□□□□ -0.23
Trav13-1A0A075B644 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav13-1A0A075B644 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13-1A0A075B644 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Gm9988-201ENSMUST00000069786 435 ntBASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav13-1A0A075B644 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms