Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8n-2A0A075B633 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav8n-2A0A075B633 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8n-2A0A075B633 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8n-2A0A075B633 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav8n-2A0A075B633 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Mir7071-201ENSMUST00000184847 69 ntBASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav8n-2A0A075B633 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8n-2A0A075B633 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav8n-2A0A075B633 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms