Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm7860-201ENSMUST00000121190 879 ntBASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm38205-201ENSMUST00000192243 258 ntBASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav5-1A0A075B5Z7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-1A0A075B5Z7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-1A0A075B5Z7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-1A0A075B5Z7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav5-1A0A075B5Z7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm7514-201ENSMUST00000209475 934 ntBASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.5■□□□□ 0.23
Trav5-1A0A075B5Z7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-1A0A075B5Z7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-1A0A075B5Z7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-1A0A075B5Z7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms