Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.28■□□□□ 0.04
Ighv3-1A0A075B5S6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ighv3-1A0A075B5S6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv3-1A0A075B5S6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ighv3-1A0A075B5S6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv3-1A0A075B5S6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv3-1A0A075B5S6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv3-1A0A075B5S6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv3-1A0A075B5S6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv3-1A0A075B5S6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ighv3-1A0A075B5S6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.27■□□□□ 0.03
Ighv3-1A0A075B5S6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv3-1A0A075B5S6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ighv3-1A0A075B5S6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv3-1A0A075B5S6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv3-1A0A075B5S6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Gm7514-201ENSMUST00000209475 934 ntBASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv3-1A0A075B5S6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv3-1A0A075B5S6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-1A0A075B5S6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.22■□□□□ 0.03
Ighv3-1A0A075B5S6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-1A0A075B5S6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-1A0A075B5S6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-1A0A075B5S6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.2■□□□□ 0.02
Ighv3-1A0A075B5S6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-1A0A075B5S6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms