Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Gm10399-202ENSMUST00000202768 748 ntBASIC14.72□□□□□ -0.05
PdfS4R2K0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PdfS4R2K0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PdfS4R2K0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PdfS4R2K0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.71□□□□□ -0.05
PdfS4R2K0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PdfS4R2K0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PdfS4R2K0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.71□□□□□ -0.05
PdfS4R2K0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PdfS4R2K0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PdfS4R2K0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PdfS4R2K0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PdfS4R2K0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.71□□□□□ -0.05
PdfS4R2K0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PdfS4R2K0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PdfS4R2K0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PdfS4R2K0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PdfS4R2K0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PdfS4R2K0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
PdfS4R2K0 Etf1-202ENSMUST00000180351 108 ntBASIC14.7□□□□□ -0.06
PdfS4R2K0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PdfS4R2K0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PdfS4R2K0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PdfS4R2K0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.69□□□□□ -0.06
PdfS4R2K0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Gm7417-201ENSMUST00000192950 473 ntBASIC14.69□□□□□ -0.06
PdfS4R2K0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.69□□□□□ -0.06
PdfS4R2K0 Gm9959-201ENSMUST00000068277 390 ntBASIC14.69□□□□□ -0.06
PdfS4R2K0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PdfS4R2K0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PdfS4R2K0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.69□□□□□ -0.06
PdfS4R2K0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.69□□□□□ -0.06
PdfS4R2K0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PdfS4R2K0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PdfS4R2K0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PdfS4R2K0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PdfS4R2K0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.68□□□□□ -0.06
PdfS4R2K0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.68□□□□□ -0.06
PdfS4R2K0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PdfS4R2K0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PdfS4R2K0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.68□□□□□ -0.06
PdfS4R2K0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PdfS4R2K0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PdfS4R2K0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PdfS4R2K0 Grk6-206ENSMUST00000224995 2971 ntBASIC14.67□□□□□ -0.06
PdfS4R2K0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PdfS4R2K0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PdfS4R2K0 Gm14117-201ENSMUST00000122417 843 ntBASIC14.67□□□□□ -0.06
PdfS4R2K0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PdfS4R2K0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PdfS4R2K0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.66□□□□□ -0.06
PdfS4R2K0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PdfS4R2K0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.66□□□□□ -0.06
PdfS4R2K0 Gm40881-201ENSMUST00000223397 166 ntBASIC14.66□□□□□ -0.06
PdfS4R2K0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms