Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Gm27502-201ENSMUST00000183495 199 ntBASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5493S4R2D1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5493S4R2D1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm5493S4R2D1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm5493S4R2D1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Gm7332-201ENSMUST00000118351 454 ntBASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5493S4R2D1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5493S4R2D1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Gm5493S4R2D1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms