Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Smad6-203ENSMUST00000179458 273 ntBASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
H2afb2S4R1M3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb2S4R1M3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb2S4R1M3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Gm45417-201ENSMUST00000209533 758 ntBASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb2S4R1M3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb2S4R1M3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb2S4R1M3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
H2afb2S4R1M3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb2S4R1M3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb2S4R1M3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb2S4R1M3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Gm6139-201ENSMUST00000079261 882 ntBASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb2S4R1M3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb2S4R1M3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Gm11421-201ENSMUST00000122124 294 ntBASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb2S4R1M3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
H2afb2S4R1M3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
H2afb2S4R1M3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb2S4R1M3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms