Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn3Q9Z0G9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn3Q9Z0G9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn3Q9Z0G9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn3Q9Z0G9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cldn3Q9Z0G9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.44■□□□□ 0.7
Cldn3Q9Z0G9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn3Q9Z0G9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn3Q9Z0G9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms