Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn5Q9WVD4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn5Q9WVD4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn5Q9WVD4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn5Q9WVD4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Gm27801-201ENSMUST00000184174 223 ntBASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn5Q9WVD4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Gm7977-201ENSMUST00000193787 748 ntBASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn5Q9WVD4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn5Q9WVD4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.93■□□□□ 0.78
Clcn5Q9WVD4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Clcn5Q9WVD4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn5Q9WVD4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn5Q9WVD4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn5Q9WVD4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Gm13168-201ENSMUST00000121771 632 ntBASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn5Q9WVD4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn5Q9WVD4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms