Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ClcnkaQ9WUB7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ClcnkaQ9WUB7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Gm6139-201ENSMUST00000079261 882 ntBASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClcnkaQ9WUB7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClcnkaQ9WUB7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Gm43173-201ENSMUST00000202246 593 ntBASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClcnkaQ9WUB7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ClcnkaQ9WUB7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClcnkaQ9WUB7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClcnkaQ9WUB7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClcnkaQ9WUB7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClcnkaQ9WUB7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Serp2-204ENSMUST00000228055 705 ntBASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ClcnkaQ9WUB7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ClcnkaQ9WUB7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms