Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf4Q9QZS2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf4Q9QZS2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf4Q9QZS2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf4Q9QZS2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf4Q9QZS2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf4Q9QZS2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf4Q9QZS2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf4Q9QZS2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf4Q9QZS2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf4Q9QZS2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf4Q9QZS2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf4Q9QZS2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf4Q9QZS2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf4Q9QZS2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf4Q9QZS2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf4Q9QZS2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf4Q9QZS2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf4Q9QZS2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms