Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcf1Q9QZM3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.43■□□□□ 0.38
Clcf1Q9QZM3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcf1Q9QZM3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcf1Q9QZM3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.4■□□□□ 0.38
Clcf1Q9QZM3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clcf1Q9QZM3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clcf1Q9QZM3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms