Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.87■■□□□ 1.09
Nr2e3Q9QXZ7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr2e3Q9QXZ7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr2e3Q9QXZ7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr2e3Q9QXZ7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr2e3Q9QXZ7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr2e3Q9QXZ7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.85■■□□□ 1.09
Nr2e3Q9QXZ7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr2e3Q9QXZ7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.85■■□□□ 1.09
Nr2e3Q9QXZ7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr2e3Q9QXZ7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nr2e3Q9QXZ7 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr2e3Q9QXZ7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nr2e3Q9QXZ7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr2e3Q9QXZ7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Nr2e3Q9QXZ7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Nr2e3Q9QXZ7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
Nr2e3Q9QXZ7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr2e3Q9QXZ7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr2e3Q9QXZ7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr2e3Q9QXZ7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr2e3Q9QXZ7 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nr2e3Q9QXZ7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nr2e3Q9QXZ7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Gm10493-201ENSMUST00000097270 612 ntBASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nr2e3Q9QXZ7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.78■■□□□ 1.08
Nr2e3Q9QXZ7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nr2e3Q9QXZ7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr2e3Q9QXZ7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.78■■□□□ 1.08
Nr2e3Q9QXZ7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
Nr2e3Q9QXZ7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms