Protein–RNA interactions for Protein: Q9JJZ9

Cngb3, Cyclic nucleotide-gated cation channel beta-3, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cngb3Q9JJZ9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cngb3Q9JJZ9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cngb3Q9JJZ9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cngb3Q9JJZ9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cngb3Q9JJZ9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cngb3Q9JJZ9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.05■□□□□ 0.64
Cngb3Q9JJZ9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cngb3Q9JJZ9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cngb3Q9JJZ9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.04■□□□□ 0.64
Cngb3Q9JJZ9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cngb3Q9JJZ9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.04■□□□□ 0.64
Cngb3Q9JJZ9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cngb3Q9JJZ9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cngb3Q9JJZ9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cngb3Q9JJZ9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.01■□□□□ 0.63
Cngb3Q9JJZ9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cngb3Q9JJZ9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cngb3Q9JJZ9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cngb3Q9JJZ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cngb3Q9JJZ9 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms