Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.46■□□□□ 0.38
Nrip3Q9JJR9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nrip3Q9JJR9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nrip3Q9JJR9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nrip3Q9JJR9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nrip3Q9JJR9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nrip3Q9JJR9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Gm15820-201ENSMUST00000201566 728 ntBASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nrip3Q9JJR9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.42■□□□□ 0.38
Nrip3Q9JJR9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Gm7417-201ENSMUST00000192950 473 ntBASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nrip3Q9JJR9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.4■□□□□ 0.38
Nrip3Q9JJR9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nrip3Q9JJR9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nrip3Q9JJR9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Nrip3Q9JJR9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms