Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lima1Q9ERG0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lima1Q9ERG0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lima1Q9ERG0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lima1Q9ERG0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Lima1Q9ERG0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lima1Q9ERG0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lima1Q9ERG0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lima1Q9ERG0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lima1Q9ERG0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms