Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf6Q9DBU5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf6Q9DBU5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf6Q9DBU5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rnf6Q9DBU5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.71■□□□□ 0.91
Rnf6Q9DBU5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf6Q9DBU5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf6Q9DBU5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf6Q9DBU5 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Gm27801-201ENSMUST00000184174 223 ntBASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf6Q9DBU5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf6Q9DBU5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf6Q9DBU5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf6Q9DBU5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Gm40848-201ENSMUST00000221998 324 ntBASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf6Q9DBU5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf6Q9DBU5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf6Q9DBU5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.64■□□□□ 0.9
Rnf6Q9DBU5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf6Q9DBU5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf6Q9DBU5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf6Q9DBU5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf6Q9DBU5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf6Q9DBU5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms