Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps33aQ9D2N9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps33aQ9D2N9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps33aQ9D2N9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vps33aQ9D2N9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps33aQ9D2N9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.45■□□□□ 0.87
Vps33aQ9D2N9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps33aQ9D2N9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.44■□□□□ 0.86
Vps33aQ9D2N9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps33aQ9D2N9 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vps33aQ9D2N9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Vps33aQ9D2N9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps33aQ9D2N9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps33aQ9D2N9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps33aQ9D2N9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms