Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Gm40848-201ENSMUST00000221998 324 ntBASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cthrc1Q9D1D6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cthrc1Q9D1D6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cthrc1Q9D1D6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cthrc1Q9D1D6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Gm27801-201ENSMUST00000184174 223 ntBASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cthrc1Q9D1D6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Golph3-202ENSMUST00000226517 2359 ntBASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cthrc1Q9D1D6 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Gm10493-201ENSMUST00000097270 612 ntBASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.89■□□□□ 0.45
Cthrc1Q9D1D6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cthrc1Q9D1D6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cthrc1Q9D1D6 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.87■□□□□ 0.45
Cthrc1Q9D1D6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cthrc1Q9D1D6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cthrc1Q9D1D6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cthrc1Q9D1D6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cthrc1Q9D1D6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms