Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrps28Q9CY16 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mrps28Q9CY16 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrps28Q9CY16 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrps28Q9CY16 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.34■□□□□ 0.37
Mrps28Q9CY16 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrps28Q9CY16 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mrps28Q9CY16 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrps28Q9CY16 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrps28Q9CY16 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrps28Q9CY16 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrps28Q9CY16 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrps28Q9CY16 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Gm40848-201ENSMUST00000221998 324 ntBASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Notumos-201ENSMUST00000151998 2659 ntBASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.32■□□□□ 0.36
Mrps28Q9CY16 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Gm27801-201ENSMUST00000184174 223 ntBASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrps28Q9CY16 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms