Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx47Q9CWX9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx47Q9CWX9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx47Q9CWX9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx47Q9CWX9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx47Q9CWX9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx47Q9CWX9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.83■□□□□ 0.77
Ddx47Q9CWX9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx47Q9CWX9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx47Q9CWX9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx47Q9CWX9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.81■□□□□ 0.76
Ddx47Q9CWX9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx47Q9CWX9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx47Q9CWX9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ddx47Q9CWX9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms