Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Mir7075-201ENSMUST00000184187 82 ntBASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Khdc3Q9CWU5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc3Q9CWU5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc3Q9CWU5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc3Q9CWU5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc3Q9CWU5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Gm45417-201ENSMUST00000209533 758 ntBASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc3Q9CWU5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Serp2-204ENSMUST00000228055 705 ntBASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Khdc3Q9CWU5 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Gm8493-201ENSMUST00000196881 489 ntBASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms