Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smurf1Q9CUN6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.46■□□□□ 0.39
Smurf1Q9CUN6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smurf1Q9CUN6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Smurf1Q9CUN6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Smurf1Q9CUN6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smurf1Q9CUN6 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smurf1Q9CUN6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.43■□□□□ 0.38
Smurf1Q9CUN6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Smurf1Q9CUN6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms