Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Gm10033-202ENSMUST00000211874 928 ntBASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Gm18671-201ENSMUST00000214826 683 ntBASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Fcf1Q9CTH6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Gm42569-201ENSMUST00000200539 472 ntBASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fcf1Q9CTH6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Fcf1Q9CTH6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fcf1Q9CTH6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fcf1Q9CTH6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fcf1Q9CTH6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fcf1Q9CTH6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fcf1Q9CTH6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Gm13234-201ENSMUST00000120010 747 ntBASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Fcf1Q9CTH6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Fcf1Q9CTH6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fcf1Q9CTH6 Gm10849-201ENSMUST00000100397 618 ntBASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Gm38205-201ENSMUST00000192243 258 ntBASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Fcf1Q9CTH6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 AV356131-201ENSMUST00000206201 750 ntBASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fcf1Q9CTH6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fcf1Q9CTH6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Fcf1Q9CTH6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms