Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Gm2559-201ENSMUST00000201323 363 ntBASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldnd1Q9CQX5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Gm715-201ENSMUST00000117865 831 ntBASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cldnd1Q9CQX5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldnd1Q9CQX5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldnd1Q9CQX5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cldnd1Q9CQX5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.83■□□□□ 0.77
Cldnd1Q9CQX5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cldnd1Q9CQX5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Cldnd1Q9CQX5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldnd1Q9CQX5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cldnd1Q9CQX5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldnd1Q9CQX5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.81■□□□□ 0.76
Cldnd1Q9CQX5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.8■□□□□ 0.76
Cldnd1Q9CQX5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms