Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm7Q9CQQ8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm7Q9CQQ8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm7Q9CQQ8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm7Q9CQQ8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Lsm7Q9CQQ8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm7Q9CQQ8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm7Q9CQQ8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms