Protein–RNA interactions for Protein: Q9CQC8

Spg21, Maspardin, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg21Q9CQC8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.29■□□□□ 0.84
Spg21Q9CQC8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Spg21Q9CQC8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg21Q9CQC8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg21Q9CQC8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Gm7860-201ENSMUST00000121190 879 ntBASIC20.28■□□□□ 0.84
Spg21Q9CQC8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg21Q9CQC8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg21Q9CQC8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg21Q9CQC8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg21Q9CQC8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg21Q9CQC8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.27■□□□□ 0.84
Spg21Q9CQC8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg21Q9CQC8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Spg21Q9CQC8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Spg21Q9CQC8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spg21Q9CQC8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.25■□□□□ 0.83
Spg21Q9CQC8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Spg21Q9CQC8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.24■□□□□ 0.83
Spg21Q9CQC8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg21Q9CQC8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Gm13168-201ENSMUST00000121771 632 ntBASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Spg21Q9CQC8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.22■□□□□ 0.83
Spg21Q9CQC8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Spg21Q9CQC8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Spg21Q9CQC8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Gm37856-201ENSMUST00000191634 999 ntBASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg21Q9CQC8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Spg21Q9CQC8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms