Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdh15Q99PJ1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Pcdh15Q99PJ1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdh15Q99PJ1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh15Q99PJ1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.31■■□□□ 1.16
Pcdh15Q99PJ1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdh15Q99PJ1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh15Q99PJ1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdh15Q99PJ1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh15Q99PJ1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh15Q99PJ1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh15Q99PJ1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh15Q99PJ1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdh15Q99PJ1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh15Q99PJ1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh15Q99PJ1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh15Q99PJ1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Pcdh15Q99PJ1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Pcdh15Q99PJ1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh15Q99PJ1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdh15Q99PJ1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdh15Q99PJ1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pcdh15Q99PJ1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdh15Q99PJ1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Mir5122-201ENSMUST00000175004 89 ntBASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh15Q99PJ1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh15Q99PJ1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdh15Q99PJ1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh15Q99PJ1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh15Q99PJ1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh15Q99PJ1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Pcdh15Q99PJ1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh15Q99PJ1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh15Q99PJ1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pcdh15Q99PJ1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh15Q99PJ1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh15Q99PJ1 Gm2399-201ENSMUST00000104944 225 ntBASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 AC121577.1-201ENSMUST00000227302 707 ntBASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh15Q99PJ1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh15Q99PJ1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdh15Q99PJ1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.21■■□□□ 1.15
Pcdh15Q99PJ1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdh15Q99PJ1 Gm9987-201ENSMUST00000069768 567 ntBASIC22.21■■□□□ 1.15
Pcdh15Q99PJ1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms