Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Gm26524-201ENSMUST00000192339 390 ntBASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col25a1Q99MQ5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col25a1Q99MQ5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Gm12896-201ENSMUST00000118430 226 ntBASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col25a1Q99MQ5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Rab3c-203ENSMUST00000224180 967 ntBASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col25a1Q99MQ5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Col25a1Q99MQ5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
Col25a1Q99MQ5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Col25a1Q99MQ5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col25a1Q99MQ5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col25a1Q99MQ5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col25a1Q99MQ5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Gm5867-201ENSMUST00000063197 592 ntBASIC20■□□□□ 0.79
Col25a1Q99MQ5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Col25a1Q99MQ5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col25a1Q99MQ5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col25a1Q99MQ5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms