Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Homer3Q99JP6 BC021767-201ENSMUST00000126387 1716 ntBASIC19.18■□□□□ 0.66
Homer3Q99JP6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Homer3Q99JP6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.18■□□□□ 0.66
Homer3Q99JP6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.18■□□□□ 0.66
Homer3Q99JP6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Homer3Q99JP6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Homer3Q99JP6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Homer3Q99JP6 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.18■□□□□ 0.66
Homer3Q99JP6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Homer3Q99JP6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Homer3Q99JP6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Homer3Q99JP6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.16■□□□□ 0.66
Homer3Q99JP6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.16■□□□□ 0.66
Homer3Q99JP6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.16■□□□□ 0.66
Homer3Q99JP6 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.16■□□□□ 0.66
Homer3Q99JP6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Homer3Q99JP6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Homer3Q99JP6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.15■□□□□ 0.66
Homer3Q99JP6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Homer3Q99JP6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.14■□□□□ 0.65
Homer3Q99JP6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Homer3Q99JP6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Homer3Q99JP6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Homer3Q99JP6 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.14■□□□□ 0.65
Homer3Q99JP6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Homer3Q99JP6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Homer3Q99JP6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Homer3Q99JP6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.14■□□□□ 0.65
Homer3Q99JP6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Homer3Q99JP6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.13■□□□□ 0.65
Homer3Q99JP6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Homer3Q99JP6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Homer3Q99JP6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.11■□□□□ 0.65
Homer3Q99JP6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.11■□□□□ 0.65
Homer3Q99JP6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Homer3Q99JP6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Homer3Q99JP6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Homer3Q99JP6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.1■□□□□ 0.65
Homer3Q99JP6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Homer3Q99JP6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Homer3Q99JP6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms