Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha2Q91Y17 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Gm8495-201ENSMUST00000188740 694 ntBASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Gm5874-201ENSMUST00000096101 508 ntBASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdha2Q91Y17 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdha2Q91Y17 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Pcdha2Q91Y17 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdha2Q91Y17 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdha2Q91Y17 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha2Q91Y17 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha2Q91Y17 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha2Q91Y17 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Reep4-203ENSMUST00000226563 1444 ntBASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Gm9988-201ENSMUST00000069786 435 ntBASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha2Q91Y17 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.62■□□□□ 0.89
Pcdha2Q91Y17 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Gm7860-201ENSMUST00000121190 879 ntBASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Gm38205-201ENSMUST00000192243 258 ntBASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha2Q91Y17 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha2Q91Y17 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdha2Q91Y17 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha2Q91Y17 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha2Q91Y17 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdha2Q91Y17 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha2Q91Y17 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.59■□□□□ 0.89
Pcdha2Q91Y17 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
Pcdha2Q91Y17 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdha2Q91Y17 Gm10033-202ENSMUST00000211874 928 ntBASIC20.58■□□□□ 0.89
Pcdha2Q91Y17 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha2Q91Y17 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdha2Q91Y17 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Gm13234-201ENSMUST00000120010 747 ntBASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha2Q91Y17 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms