Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb22Q91XZ8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb22Q91XZ8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb22Q91XZ8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
Pcdhb22Q91XZ8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb22Q91XZ8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb22Q91XZ8 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.56■■□□□ 1.2
Pcdhb22Q91XZ8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb22Q91XZ8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb22Q91XZ8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pcdhb22Q91XZ8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Golph3-202ENSMUST00000226517 2359 ntBASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhb22Q91XZ8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhb22Q91XZ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb22Q91XZ8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhb22Q91XZ8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Pcdhb22Q91XZ8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb22Q91XZ8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb22Q91XZ8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms